Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PrkcbP68404 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Snord83b-201ENSMUST00000104546 94 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Gm3890-201ENSMUST00000182416 207 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Gm43118-201ENSMUST00000199149 775 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.07□□□□□ -0.16
PrkcbP68404 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.07□□□□□ -0.16
PrkcbP68404 Gm7399-201ENSMUST00000032395 858 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PrkcbP68404 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PrkcbP68404 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PrkcbP68404 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkcbP68404 Grk6-205ENSMUST00000224653 2976 ntBASIC14.07□□□□□ -0.16
PrkcbP68404 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
PrkcbP68404 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PrkcbP68404 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.06□□□□□ -0.16
PrkcbP68404 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PrkcbP68404 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PrkcbP68404 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PrkcbP68404 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.06□□□□□ -0.16
PrkcbP68404 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkcbP68404 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PrkcbP68404 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.05□□□□□ -0.16
PrkcbP68404 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.05□□□□□ -0.16
PrkcbP68404 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PrkcbP68404 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
PrkcbP68404 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.05□□□□□ -0.16
PrkcbP68404 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkcbP68404 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkcbP68404 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms