Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.36□□□□□ -0.11
Hmgb1P63158 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.36□□□□□ -0.11
Hmgb1P63158 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.35□□□□□ -0.11
Hmgb1P63158 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Gm44855-201ENSMUST00000205725 362 ntBASIC14.35□□□□□ -0.11
Hmgb1P63158 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Itm2b-204ENSMUST00000228637 783 ntBASIC14.35□□□□□ -0.11
Hmgb1P63158 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb1P63158 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgb1P63158 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmgb1P63158 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Gm5687-201ENSMUST00000118252 640 ntBASIC14.34□□□□□ -0.11
Hmgb1P63158 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Mir7654-201ENSMUST00000185082 70 ntBASIC14.34□□□□□ -0.11
Hmgb1P63158 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.34□□□□□ -0.11
Hmgb1P63158 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgb1P63158 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.34□□□□□ -0.11
Hmgb1P63158 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgb1P63158 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.33□□□□□ -0.11
Hmgb1P63158 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Hmgb1P63158 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgb1P63158 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Hmgb1P63158 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgb1P63158 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgb1P63158 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms