Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm13223-201ENSMUST00000118609 747 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm27306-201ENSMUST00000183970 107 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm36991-201ENSMUST00000191800 648 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm18905-201ENSMUST00000205454 928 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm46209-201ENSMUST00000217912 553 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Gm24447-201ENSMUST00000083977 338 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.58□□□□□ -0.56
Sf3b6P59708 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b6P59708 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3b6P59708 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sf3b6P59708 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.57□□□□□ -0.56
Sf3b6P59708 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm27680-201ENSMUST00000184192 160 ntBASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm27989-201ENSMUST00000184721 107 ntBASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm38294-201ENSMUST00000192831 381 ntBASIC11.57□□□□□ -0.56
Sf3b6P59708 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.57□□□□□ -0.56
Sf3b6P59708 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sf3b6P59708 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.57□□□□□ -0.56
Sf3b6P59708 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Sf3b6P59708 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3b6P59708 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.57□□□□□ -0.56
Sf3b6P59708 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sf3b6P59708 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Sf3b6P59708 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sf3b6P59708 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sf3b6P59708 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sf3b6P59708 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.56□□□□□ -0.56
Sf3b6P59708 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.56□□□□□ -0.56
Sf3b6P59708 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sf3b6P59708 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.56□□□□□ -0.56
Sf3b6P59708 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.56□□□□□ -0.56
Sf3b6P59708 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.56□□□□□ -0.56
Sf3b6P59708 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3b6P59708 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms