Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Gm14028-201ENSMUST00000117434 479 ntBASIC17.46■□□□□ 0.39
Nphp4P59240 Gm7857-201ENSMUST00000117957 358 ntBASIC17.46■□□□□ 0.39
Nphp4P59240 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Mir3102-201ENSMUST00000175555 104 ntBASIC17.46■□□□□ 0.39
Nphp4P59240 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Rps4l-202ENSMUST00000204242 789 ntBASIC17.46■□□□□ 0.39
Nphp4P59240 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.46■□□□□ 0.39
Nphp4P59240 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nphp4P59240 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp4P59240 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC17.46■□□□□ 0.38
Nphp4P59240 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp4P59240 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp4P59240 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp4P59240 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.46■□□□□ 0.38
Nphp4P59240 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp4P59240 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp4P59240 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp4P59240 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp4P59240 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.45■□□□□ 0.38
Nphp4P59240 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp4P59240 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC17.45■□□□□ 0.38
Nphp4P59240 Gm6963-201ENSMUST00000147879 379 ntBASIC17.45■□□□□ 0.38
Nphp4P59240 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Nphp4P59240 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Nphp4P59240 Rprl1-202ENSMUST00000198476 238 ntBASIC17.45■□□□□ 0.38
Nphp4P59240 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC17.45■□□□□ 0.38
Nphp4P59240 Gm19187-201ENSMUST00000206781 892 ntBASIC17.45■□□□□ 0.38
Nphp4P59240 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp4P59240 AC093022.5-201ENSMUST00000226841 1079 ntBASIC17.45■□□□□ 0.38
Nphp4P59240 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp4P59240 AC122197.2-201ENSMUST00000219196 1635 ntBASIC17.45■□□□□ 0.38
Nphp4P59240 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.44■□□□□ 0.38
Nphp4P59240 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC17.44■□□□□ 0.38
Nphp4P59240 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nphp4P59240 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nphp4P59240 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC17.44■□□□□ 0.38
Nphp4P59240 Gm5638-201ENSMUST00000118618 1258 ntBASIC17.44■□□□□ 0.38
Nphp4P59240 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC17.44■□□□□ 0.38
Nphp4P59240 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC17.44■□□□□ 0.38
Nphp4P59240 Gm25732-201ENSMUST00000175168 60 ntBASIC17.44■□□□□ 0.38
Nphp4P59240 Gm44262-201ENSMUST00000204969 372 ntBASIC17.44■□□□□ 0.38
Nphp4P59240 Gzmn-202ENSMUST00000225535 989 ntBASIC17.44■□□□□ 0.38
Nphp4P59240 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp4P59240 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC17.44■□□□□ 0.38
Nphp4P59240 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nphp4P59240 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nphp4P59240 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Nphp4P59240 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC17.43■□□□□ 0.38
Nphp4P59240 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Nphp4P59240 Gstp-ps-201ENSMUST00000195526 631 ntBASIC17.43■□□□□ 0.38
Nphp4P59240 Gm8913-201ENSMUST00000209491 641 ntBASIC17.43■□□□□ 0.38
Nphp4P59240 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.43■□□□□ 0.38
Nphp4P59240 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Gm10312-201ENSMUST00000078515 489 ntBASIC17.43■□□□□ 0.38
Nphp4P59240 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.43■□□□□ 0.38
Nphp4P59240 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.43■□□□□ 0.38
Nphp4P59240 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Nphp4P59240 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Nphp4P59240 Gm45495-201ENSMUST00000200940 1700 ntBASIC17.43■□□□□ 0.38
Nphp4P59240 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nphp4P59240 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms