Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm4875-201ENSMUST00000118257 786 ntBASIC10.53□□□□□ -0.72
Sssca1P56873 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.53□□□□□ -0.72
Sssca1P56873 Gm22175-201ENSMUST00000175007 78 ntBASIC10.53□□□□□ -0.72
Sssca1P56873 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.53□□□□□ -0.72
Sssca1P56873 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.53□□□□□ -0.72
Sssca1P56873 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Gm8396-201ENSMUST00000057361 823 ntBASIC10.53□□□□□ -0.72
Sssca1P56873 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.53□□□□□ -0.72
Sssca1P56873 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.53□□□□□ -0.72
Sssca1P56873 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Sssca1P56873 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Sssca1P56873 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Sssca1P56873 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sssca1P56873 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sssca1P56873 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.53□□□□□ -0.72
Sssca1P56873 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sssca1P56873 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sssca1P56873 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sssca1P56873 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.52□□□□□ -0.72
Sssca1P56873 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.52□□□□□ -0.72
Sssca1P56873 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sssca1P56873 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.52□□□□□ -0.72
Sssca1P56873 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm13453-201ENSMUST00000118708 357 ntBASIC10.52□□□□□ -0.73
Sssca1P56873 Gm12485-201ENSMUST00000119641 291 ntBASIC10.52□□□□□ -0.73
Sssca1P56873 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm38294-201ENSMUST00000192831 381 ntBASIC10.52□□□□□ -0.73
Sssca1P56873 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.52□□□□□ -0.73
Sssca1P56873 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.52□□□□□ -0.73
Sssca1P56873 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.52□□□□□ -0.73
Sssca1P56873 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sssca1P56873 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.52□□□□□ -0.73
Sssca1P56873 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.52□□□□□ -0.73
Sssca1P56873 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.52□□□□□ -0.73
Sssca1P56873 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.52□□□□□ -0.73
Sssca1P56873 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.52□□□□□ -0.73
Sssca1P56873 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sssca1P56873 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sssca1P56873 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.51□□□□□ -0.73
Sssca1P56873 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.51□□□□□ -0.73
Sssca1P56873 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.51□□□□□ -0.73
Sssca1P56873 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sssca1P56873 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sssca1P56873 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sssca1P56873 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms