Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.25□□□□□ -0.29
Sox1P53783 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Gm12899-201ENSMUST00000120565 551 ntBASIC13.25□□□□□ -0.29
Sox1P53783 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox1P53783 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Gm9139-201ENSMUST00000218817 700 ntBASIC13.25□□□□□ -0.29
Sox1P53783 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Mir483-201ENSMUST00000093631 73 ntBASIC13.25□□□□□ -0.29
Sox1P53783 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Sox1P53783 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox1P53783 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox1P53783 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.24□□□□□ -0.29
Sox1P53783 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Gm11980-201ENSMUST00000121445 986 ntBASIC13.24□□□□□ -0.29
Sox1P53783 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.24□□□□□ -0.29
Sox1P53783 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 Gm9132-201ENSMUST00000210182 832 ntBASIC13.24□□□□□ -0.29
Sox1P53783 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.24□□□□□ -0.29
Sox1P53783 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Sox1P53783 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.24□□□□□ -0.29
Sox1P53783 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox1P53783 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sox1P53783 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox1P53783 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox1P53783 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox1P53783 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox1P53783 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Gm24845-201ENSMUST00000158034 109 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox1P53783 Gm27627-201ENSMUST00000183644 150 ntBASIC13.23□□□□□ -0.29
Sox1P53783 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox1P53783 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.23□□□□□ -0.29
Sox1P53783 Gm37201-201ENSMUST00000191845 523 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms