Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.89□□□□□ -0.35
Pdx1P52946 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.89□□□□□ -0.35
Pdx1P52946 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pdx1P52946 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Pdx1P52946 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pdx1P52946 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Pdx1P52946 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
Pdx1P52946 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pdx1P52946 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Pdx1P52946 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Mir686-201ENSMUST00000102174 109 ntBASIC12.88□□□□□ -0.35
Pdx1P52946 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.88□□□□□ -0.35
Pdx1P52946 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.88□□□□□ -0.35
Pdx1P52946 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pdx1P52946 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pdx1P52946 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.88□□□□□ -0.35
Pdx1P52946 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pdx1P52946 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Pdx1P52946 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pdx1P52946 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.88□□□□□ -0.35
Pdx1P52946 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdx1P52946 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.88□□□□□ -0.35
Pdx1P52946 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.87□□□□□ -0.35
Pdx1P52946 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Gm4984-201ENSMUST00000115987 360 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Gm16479-201ENSMUST00000121706 932 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.87□□□□□ -0.35
Pdx1P52946 Gm29127-201ENSMUST00000188304 517 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Gm6266-201ENSMUST00000203844 806 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.87□□□□□ -0.35
Pdx1P52946 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pdx1P52946 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pdx1P52946 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pdx1P52946 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.87□□□□□ -0.35
Pdx1P52946 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pdx1P52946 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdx1P52946 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.87□□□□□ -0.35
Pdx1P52946 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pdx1P52946 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms