Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.19□□□□□ -0.3
Lhx3P50481 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx3P50481 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx3P50481 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lhx3P50481 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Lhx3P50481 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.18□□□□□ -0.3
Lhx3P50481 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.18□□□□□ -0.3
Lhx3P50481 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.18□□□□□ -0.3
Lhx3P50481 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.18□□□□□ -0.3
Lhx3P50481 Gm23363-201ENSMUST00000175024 79 ntBASIC13.18□□□□□ -0.3
Lhx3P50481 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.18□□□□□ -0.3
Lhx3P50481 Gm27572-201ENSMUST00000183702 255 ntBASIC13.18□□□□□ -0.3
Lhx3P50481 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.18□□□□□ -0.3
Lhx3P50481 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Mir339-201ENSMUST00000083659 96 ntBASIC13.18□□□□□ -0.3
Lhx3P50481 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.18□□□□□ -0.3
Lhx3P50481 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Lhx3P50481 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx3P50481 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.17□□□□□ -0.3
Lhx3P50481 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.17□□□□□ -0.3
Lhx3P50481 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Lhx3P50481 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 Gm45880-201ENSMUST00000213041 853 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Gm9823-201ENSMUST00000051212 327 ntBASIC13.17□□□□□ -0.3
Lhx3P50481 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lhx3P50481 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.17□□□□□ -0.3
Lhx3P50481 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.17□□□□□ -0.3
Lhx3P50481 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx3P50481 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx3P50481 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lhx3P50481 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.16□□□□□ -0.3
Lhx3P50481 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.16□□□□□ -0.3
Lhx3P50481 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 Gm13813-201ENSMUST00000120998 787 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.16□□□□□ -0.3
Lhx3P50481 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx3P50481 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 Gm42693-201ENSMUST00000196779 631 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 Gm43133-201ENSMUST00000197472 463 ntBASIC13.16□□□□□ -0.3
Lhx3P50481 Gm18584-201ENSMUST00000203098 964 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms