Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.33□□□□□ -0.28
SftpbP50405 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SftpbP50405 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SftpbP50405 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.32□□□□□ -0.28
SftpbP50405 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SftpbP50405 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.32□□□□□ -0.28
SftpbP50405 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.32□□□□□ -0.28
SftpbP50405 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SftpbP50405 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.32□□□□□ -0.28
SftpbP50405 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SftpbP50405 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SftpbP50405 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SftpbP50405 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
SftpbP50405 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SftpbP50405 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Syt7-204ENSMUST00000223586 1344 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.32□□□□□ -0.28
SftpbP50405 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.32□□□□□ -0.28
SftpbP50405 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SftpbP50405 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.31□□□□□ -0.28
SftpbP50405 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SftpbP50405 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SftpbP50405 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SftpbP50405 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SftpbP50405 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.31□□□□□ -0.28
SftpbP50405 Gm6447-201ENSMUST00000118905 835 ntBASIC13.31□□□□□ -0.28
SftpbP50405 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.31□□□□□ -0.28
SftpbP50405 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.31□□□□□ -0.28
SftpbP50405 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.31□□□□□ -0.28
SftpbP50405 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.31□□□□□ -0.28
SftpbP50405 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.31□□□□□ -0.28
SftpbP50405 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SftpbP50405 Gm42612-201ENSMUST00000197986 623 ntBASIC13.31□□□□□ -0.28
SftpbP50405 Gm43170-201ENSMUST00000199827 612 ntBASIC13.31□□□□□ -0.28
SftpbP50405 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms