Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Gm22138-201ENSMUST00000158748 128 ntBASIC14.34□□□□□ -0.11
Brca1P48754 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Gm27530-201ENSMUST00000184096 98 ntBASIC14.34□□□□□ -0.11
Brca1P48754 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Gm4607-201ENSMUST00000206649 577 ntBASIC14.34□□□□□ -0.11
Brca1P48754 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.34□□□□□ -0.11
Brca1P48754 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Brca1P48754 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Brca1P48754 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brca1P48754 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.33□□□□□ -0.11
Brca1P48754 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brca1P48754 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brca1P48754 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Brca1P48754 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brca1P48754 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brca1P48754 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brca1P48754 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Brca1P48754 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.33□□□□□ -0.12
Brca1P48754 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.33□□□□□ -0.12
Brca1P48754 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Gm12501-201ENSMUST00000119163 529 ntBASIC14.33□□□□□ -0.12
Brca1P48754 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.33□□□□□ -0.12
Brca1P48754 Gm44958-201ENSMUST00000203734 736 ntBASIC14.33□□□□□ -0.12
Brca1P48754 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Brca1P48754 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.33□□□□□ -0.12
Brca1P48754 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Gm21811-201ENSMUST00000096485 930 ntBASIC14.33□□□□□ -0.12
Brca1P48754 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brca1P48754 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.32□□□□□ -0.12
Brca1P48754 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Brca1P48754 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.32□□□□□ -0.12
Brca1P48754 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.32□□□□□ -0.12
Brca1P48754 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.32□□□□□ -0.12
Brca1P48754 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.32□□□□□ -0.12
Brca1P48754 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Brca1P48754 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.32□□□□□ -0.12
Brca1P48754 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.32□□□□□ -0.12
Brca1P48754 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Brca1P48754 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.32□□□□□ -0.12
Brca1P48754 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brca1P48754 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.31□□□□□ -0.12
Brca1P48754 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.31□□□□□ -0.12
Brca1P48754 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.31□□□□□ -0.12
Brca1P48754 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.31□□□□□ -0.12
Brca1P48754 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms