Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sox2P48432 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sox2P48432 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Sox2P48432 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.21□□□□□ -0.46
Sox2P48432 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.21□□□□□ -0.46
Sox2P48432 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.21□□□□□ -0.46
Sox2P48432 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox2P48432 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox2P48432 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox2P48432 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.21□□□□□ -0.46
Sox2P48432 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox2P48432 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox2P48432 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox2P48432 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox2P48432 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Gm4875-201ENSMUST00000118257 786 ntBASIC12.2□□□□□ -0.46
Sox2P48432 Gm14767-201ENSMUST00000121559 586 ntBASIC12.2□□□□□ -0.46
Sox2P48432 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Sox2P48432 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sox2P48432 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Gm27618-201ENSMUST00000183671 60 ntBASIC12.2□□□□□ -0.46
Sox2P48432 Gm29608-201ENSMUST00000190444 463 ntBASIC12.2□□□□□ -0.46
Sox2P48432 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox2P48432 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox2P48432 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.2□□□□□ -0.46
Sox2P48432 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.2□□□□□ -0.46
Sox2P48432 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.2□□□□□ -0.46
Sox2P48432 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox2P48432 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox2P48432 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox2P48432 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Sox2P48432 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Sox2P48432 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.19□□□□□ -0.46
Sox2P48432 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sox2P48432 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.19□□□□□ -0.46
Sox2P48432 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox2P48432 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Gm24447-201ENSMUST00000083977 338 ntBASIC12.19□□□□□ -0.46
Sox2P48432 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox2P48432 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox2P48432 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox2P48432 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms