Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.79□□□□□ -0.52
Rfx3P48381 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.78□□□□□ -0.52
Rfx3P48381 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.78□□□□□ -0.52
Rfx3P48381 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rfx3P48381 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.78□□□□□ -0.52
Rfx3P48381 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.78□□□□□ -0.52
Rfx3P48381 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 Gm5866-201ENSMUST00000177881 973 ntBASIC11.78□□□□□ -0.52
Rfx3P48381 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.78□□□□□ -0.52
Rfx3P48381 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.78□□□□□ -0.52
Rfx3P48381 Gm19220-201ENSMUST00000222682 803 ntBASIC11.78□□□□□ -0.52
Rfx3P48381 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.78□□□□□ -0.52
Rfx3P48381 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.78□□□□□ -0.52
Rfx3P48381 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Rfx3P48381 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rfx3P48381 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfx3P48381 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.78□□□□□ -0.52
Rfx3P48381 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfx3P48381 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfx3P48381 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rfx3P48381 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfx3P48381 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Rfx3P48381 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfx3P48381 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.77□□□□□ -0.52
Rfx3P48381 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfx3P48381 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfx3P48381 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.77□□□□□ -0.52
Rfx3P48381 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.77□□□□□ -0.53
Rfx3P48381 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Rfx3P48381 Gm15376-201ENSMUST00000122258 783 ntBASIC11.77□□□□□ -0.53
Rfx3P48381 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rfx3P48381 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.77□□□□□ -0.53
Rfx3P48381 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Gm42550-201ENSMUST00000201553 960 ntBASIC11.77□□□□□ -0.53
Rfx3P48381 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Gm7730-201ENSMUST00000212486 454 ntBASIC11.77□□□□□ -0.53
Rfx3P48381 Gm5186-201ENSMUST00000218781 920 ntBASIC11.77□□□□□ -0.53
Rfx3P48381 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.77□□□□□ -0.53
Rfx3P48381 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rfx3P48381 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rfx3P48381 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Rfx3P48381 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.77□□□□□ -0.53
Rfx3P48381 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfx3P48381 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.77□□□□□ -0.53
Rfx3P48381 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.76□□□□□ -0.53
Rfx3P48381 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Rfx3P48381 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms