Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Rfx2P48379 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rfx2P48379 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.66□□□□□ -0.22
Rfx2P48379 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.66□□□□□ -0.22
Rfx2P48379 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm13369-201ENSMUST00000119442 987 ntBASIC13.66□□□□□ -0.22
Rfx2P48379 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm26927-201ENSMUST00000182385 965 ntBASIC13.66□□□□□ -0.22
Rfx2P48379 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.66□□□□□ -0.22
Rfx2P48379 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.66□□□□□ -0.22
Rfx2P48379 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rfx2P48379 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx2P48379 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Rfx2P48379 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfx2P48379 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Rfx2P48379 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.65□□□□□ -0.22
Rfx2P48379 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.65□□□□□ -0.22
Rfx2P48379 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.65□□□□□ -0.22
Rfx2P48379 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Rfx2P48379 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Gm7399-201ENSMUST00000032395 858 ntBASIC13.65□□□□□ -0.22
Rfx2P48379 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.65□□□□□ -0.22
Rfx2P48379 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.65□□□□□ -0.22
Rfx2P48379 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.65□□□□□ -0.22
Rfx2P48379 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.65□□□□□ -0.22
Rfx2P48379 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.65□□□□□ -0.22
Rfx2P48379 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx2P48379 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx2P48379 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Rfx2P48379 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.64□□□□□ -0.23
Rfx2P48379 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Rfx2P48379 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.64□□□□□ -0.23
Rfx2P48379 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx2P48379 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rfx2P48379 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms