Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm4271-201ENSMUST00000174444 973 ntBASIC11.93□□□□□ -0.5
Nkx2-2P42586 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.93□□□□□ -0.5
Nkx2-2P42586 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm10146-201ENSMUST00000072739 309 ntBASIC11.93□□□□□ -0.5
Nkx2-2P42586 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.93□□□□□ -0.5
Nkx2-2P42586 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-2P42586 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.92□□□□□ -0.5
Nkx2-2P42586 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Gm13813-201ENSMUST00000120998 787 ntBASIC11.92□□□□□ -0.5
Nkx2-2P42586 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.92□□□□□ -0.5
Nkx2-2P42586 Gm29649-201ENSMUST00000185649 419 ntBASIC11.92□□□□□ -0.5
Nkx2-2P42586 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.92□□□□□ -0.5
Nkx2-2P42586 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.92□□□□□ -0.5
Nkx2-2P42586 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.92□□□□□ -0.5
Nkx2-2P42586 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-2P42586 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nkx2-2P42586 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-2P42586 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms