Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC8.77□□□□□ -1.01
Rpl28P41105 Shd-206ENSMUST00000225145 998 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 AC093022.5-201ENSMUST00000226841 1079 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rpl28P41105 AC166574.4-201ENSMUST00000227165 1937 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC8.77□□□□□ -1.01
Rpl28P41105 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 AC159195.1-201ENSMUST00000225867 2086 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC8.77□□□□□ -1.01
Rpl28P41105 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm44401-201ENSMUST00000204462 2375 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Rpl28P41105 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Rpl28P41105 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Rpl28P41105 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC8.76□□□□□ -1.01
Rpl28P41105 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Rpl28P41105 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Gm13453-201ENSMUST00000118708 357 ntBASIC8.76□□□□□ -1.01
Rpl28P41105 Gm13616-201ENSMUST00000120600 222 ntBASIC8.76□□□□□ -1.01
Rpl28P41105 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Gm17837-201ENSMUST00000186435 985 ntBASIC8.76□□□□□ -1.01
Rpl28P41105 Ighv1-51-201ENSMUST00000192903 354 ntBASIC8.76□□□□□ -1.01
Rpl28P41105 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 AC123834.1-201ENSMUST00000225346 2043 ntBASIC8.76□□□□□ -1.01
Rpl28P41105 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 AC159621.2-201ENSMUST00000223519 1326 ntBASIC8.76□□□□□ -1.01
Rpl28P41105 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl28P41105 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC8.76□□□□□ -1.01
Rpl28P41105 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC8.75□□□□□ -1.01
Rpl28P41105 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Gm45011-201ENSMUST00000207620 2297 ntBASIC8.75□□□□□ -1.01
Rpl28P41105 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC8.75□□□□□ -1.01
Rpl28P41105 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Gm5320-201ENSMUST00000207163 1519 ntBASIC8.75□□□□□ -1.01
Rpl28P41105 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Rpl28P41105 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl28P41105 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms