Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.25□□□□□ -0.45
Sox6P40645 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
Sox6P40645 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox6P40645 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox6P40645 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox6P40645 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.24□□□□□ -0.45
Sox6P40645 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sox6P40645 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sox6P40645 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sox6P40645 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Gm15770-201ENSMUST00000117498 584 ntBASIC12.24□□□□□ -0.45
Sox6P40645 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox6P40645 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sox6P40645 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Sox6P40645 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Gm5354-201ENSMUST00000182417 973 ntBASIC12.24□□□□□ -0.45
Sox6P40645 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Sox6P40645 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.24□□□□□ -0.45
Sox6P40645 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Sox6P40645 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Sox6P40645 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sox6P40645 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox6P40645 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Sox6P40645 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.23□□□□□ -0.45
Sox6P40645 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Gm12859-201ENSMUST00000117834 427 ntBASIC12.23□□□□□ -0.45
Sox6P40645 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox6P40645 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Gm28631-201ENSMUST00000190740 334 ntBASIC12.23□□□□□ -0.45
Sox6P40645 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.23□□□□□ -0.45
Sox6P40645 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox6P40645 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox6P40645 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms