Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.63□□□□□ -0.39
TfamP40630 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.63□□□□□ -0.39
TfamP40630 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.63□□□□□ -0.39
TfamP40630 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.63□□□□□ -0.39
TfamP40630 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TfamP40630 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TfamP40630 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TfamP40630 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TfamP40630 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.62□□□□□ -0.39
TfamP40630 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.62□□□□□ -0.39
TfamP40630 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TfamP40630 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.62□□□□□ -0.39
TfamP40630 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
TfamP40630 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.62□□□□□ -0.39
TfamP40630 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Gm15371-201ENSMUST00000117057 784 ntBASIC12.62□□□□□ -0.39
TfamP40630 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TfamP40630 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.62□□□□□ -0.39
TfamP40630 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.62□□□□□ -0.39
TfamP40630 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.62□□□□□ -0.39
TfamP40630 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.62□□□□□ -0.39
TfamP40630 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TfamP40630 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TfamP40630 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TfamP40630 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TfamP40630 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Gm12341-201ENSMUST00000119724 503 ntBASIC12.61□□□□□ -0.39
TfamP40630 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
TfamP40630 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.61□□□□□ -0.39
TfamP40630 Gm28631-201ENSMUST00000190740 334 ntBASIC12.61□□□□□ -0.39
TfamP40630 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.61□□□□□ -0.39
TfamP40630 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TfamP40630 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.61□□□□□ -0.39
TfamP40630 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.61□□□□□ -0.39
TfamP40630 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.61□□□□□ -0.39
TfamP40630 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TfamP40630 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TfamP40630 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TfamP40630 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TfamP40630 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms