Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Foxa1P35582 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.04□□□□□ -0.48
Foxa1P35582 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Foxa1P35582 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.04□□□□□ -0.48
Foxa1P35582 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.04□□□□□ -0.48
Foxa1P35582 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.04□□□□□ -0.48
Foxa1P35582 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.04□□□□□ -0.48
Foxa1P35582 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.04□□□□□ -0.48
Foxa1P35582 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.04□□□□□ -0.48
Foxa1P35582 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.04□□□□□ -0.48
Foxa1P35582 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.04□□□□□ -0.48
Foxa1P35582 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Foxa1P35582 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.04□□□□□ -0.48
Foxa1P35582 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxa1P35582 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Foxa1P35582 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.03□□□□□ -0.48
Foxa1P35582 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.03□□□□□ -0.48
Foxa1P35582 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Mir686-201ENSMUST00000102174 109 ntBASIC12.03□□□□□ -0.48
Foxa1P35582 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Foxa1P35582 Gm16479-201ENSMUST00000121706 932 ntBASIC12.03□□□□□ -0.48
Foxa1P35582 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.03□□□□□ -0.48
Foxa1P35582 Gm4271-201ENSMUST00000174444 973 ntBASIC12.03□□□□□ -0.48
Foxa1P35582 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.03□□□□□ -0.48
Foxa1P35582 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Foxa1P35582 Gm18187-201ENSMUST00000196476 984 ntBASIC12.03□□□□□ -0.48
Foxa1P35582 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.03□□□□□ -0.48
Foxa1P35582 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.03□□□□□ -0.48
Foxa1P35582 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.03□□□□□ -0.48
Foxa1P35582 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Foxa1P35582 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.03□□□□□ -0.48
Foxa1P35582 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Foxa1P35582 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Foxa1P35582 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Foxa1P35582 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.02□□□□□ -0.48
Foxa1P35582 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Foxa1P35582 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 188.6 ms