Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Gm12138-201ENSMUST00000122180 951 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.34□□□□□ -0.27
Mmp13P33435 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp13P33435 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Mmp13P33435 Mir7654-201ENSMUST00000185082 70 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp13P33435 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gm24447-201ENSMUST00000083977 338 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp13P33435 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp13P33435 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Mmp13P33435 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Mmp13P33435 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.34□□□□□ -0.27
Mmp13P33435 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp13P33435 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp13P33435 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp13P33435 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Mmp13P33435 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.27
Mmp13P33435 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.33□□□□□ -0.28
Mmp13P33435 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.33□□□□□ -0.28
Mmp13P33435 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.33□□□□□ -0.28
Mmp13P33435 Gm5186-201ENSMUST00000218781 920 ntBASIC13.33□□□□□ -0.28
Mmp13P33435 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.33□□□□□ -0.28
Mmp13P33435 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.33□□□□□ -0.28
Mmp13P33435 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.33□□□□□ -0.28
Mmp13P33435 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp13P33435 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Mmp13P33435 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.33□□□□□ -0.28
Mmp13P33435 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Mmp13P33435 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.33□□□□□ -0.28
Mmp13P33435 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp13P33435 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp13P33435 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.32□□□□□ -0.28
Mmp13P33435 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mmp13P33435 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mmp13P33435 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Mmp13P33435 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Mmp13P33435 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.32□□□□□ -0.28
Mmp13P33435 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Mmp13P33435 Gm19931-201ENSMUST00000198920 368 ntBASIC13.32□□□□□ -0.28
Mmp13P33435 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.32□□□□□ -0.28
Mmp13P33435 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp13P33435 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.32□□□□□ -0.28
Mmp13P33435 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms