Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Vcam1P29533 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Vcam1P29533 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.91□□□□□ -0.02
Vcam1P29533 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.91□□□□□ -0.02
Vcam1P29533 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Vcam1P29533 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.9□□□□□ -0.02
Vcam1P29533 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 Gm13813-201ENSMUST00000120998 787 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 Gm15547-201ENSMUST00000122152 333 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.9□□□□□ -0.02
Vcam1P29533 Gm16570-201ENSMUST00000161951 436 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Mir7070-201ENSMUST00000183657 86 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.9□□□□□ -0.02
Vcam1P29533 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Vcam1P29533 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Vcam1P29533 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.9□□□□□ -0.02
Vcam1P29533 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vcam1P29533 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcam1P29533 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.9□□□□□ -0.02
Vcam1P29533 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.89□□□□□ -0.03
Vcam1P29533 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.89□□□□□ -0.03
Vcam1P29533 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Gm13570-201ENSMUST00000140763 309 ntBASIC14.89□□□□□ -0.03
Vcam1P29533 Gm15276-201ENSMUST00000145953 498 ntBASIC14.89□□□□□ -0.03
Vcam1P29533 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.89□□□□□ -0.03
Vcam1P29533 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vcam1P29533 Gm37201-201ENSMUST00000191845 523 ntBASIC14.89□□□□□ -0.03
Vcam1P29533 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vcam1P29533 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vcam1P29533 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcam1P29533 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.88□□□□□ -0.03
Vcam1P29533 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vcam1P29533 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcam1P29533 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms