Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.87□□□□□ -0.67
Col8a2P25318 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Col8a2P25318 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.87□□□□□ -0.67
Col8a2P25318 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.87□□□□□ -0.67
Col8a2P25318 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.87□□□□□ -0.67
Col8a2P25318 Gm15198-201ENSMUST00000117283 177 ntBASIC10.87□□□□□ -0.67
Col8a2P25318 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.87□□□□□ -0.67
Col8a2P25318 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.87□□□□□ -0.67
Col8a2P25318 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.87□□□□□ -0.67
Col8a2P25318 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.87□□□□□ -0.67
Col8a2P25318 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.87□□□□□ -0.67
Col8a2P25318 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Col8a2P25318 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col8a2P25318 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.87□□□□□ -0.67
Col8a2P25318 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.87□□□□□ -0.67
Col8a2P25318 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Col8a2P25318 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col8a2P25318 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.86□□□□□ -0.67
Col8a2P25318 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.86□□□□□ -0.67
Col8a2P25318 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm6334-201ENSMUST00000207083 228 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm7399-201ENSMUST00000032395 858 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col8a2P25318 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.86□□□□□ -0.67
Col8a2P25318 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col8a2P25318 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Col8a2P25318 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms