Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pde6bP23440 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.24□□□□□ -0.13
Pde6bP23440 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pde6bP23440 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pde6bP23440 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Gm16479-201ENSMUST00000121706 932 ntBASIC14.24□□□□□ -0.13
Pde6bP23440 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pde6bP23440 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Gm6222-202ENSMUST00000182143 629 ntBASIC14.24□□□□□ -0.13
Pde6bP23440 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.24□□□□□ -0.13
Pde6bP23440 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.24□□□□□ -0.13
Pde6bP23440 Cts7-204ENSMUST00000225321 1257 ntBASIC14.24□□□□□ -0.13
Pde6bP23440 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.24□□□□□ -0.13
Pde6bP23440 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.24□□□□□ -0.13
Pde6bP23440 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pde6bP23440 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6bP23440 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pde6bP23440 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm6023-201ENSMUST00000118217 606 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 Gm13786-201ENSMUST00000122371 333 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.23□□□□□ -0.13
Pde6bP23440 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.23□□□□□ -0.13
Pde6bP23440 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm6334-201ENSMUST00000207083 228 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 Gm45865-201ENSMUST00000211815 945 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Gm24526-201ENSMUST00000082921 158 ntBASIC14.23□□□□□ -0.13
Pde6bP23440 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pde6bP23440 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pde6bP23440 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pde6bP23440 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6bP23440 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pde6bP23440 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pde6bP23440 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pde6bP23440 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.22□□□□□ -0.13
Pde6bP23440 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Gm11591-201ENSMUST00000120063 702 ntBASIC14.22□□□□□ -0.13
Pde6bP23440 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Gm38241-201ENSMUST00000192641 898 ntBASIC14.22□□□□□ -0.13
Pde6bP23440 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.22□□□□□ -0.13
Pde6bP23440 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.22□□□□□ -0.13
Pde6bP23440 Gm19163-201ENSMUST00000223313 780 ntBASIC14.22□□□□□ -0.13
Pde6bP23440 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Pde6bP23440 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms