Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prim1P20664 Gm42651-201ENSMUST00000199851 1339 ntBASIC16.62■□□□□ 0.25
Prim1P20664 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Prim1P20664 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.62■□□□□ 0.25
Prim1P20664 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Prim1P20664 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prim1P20664 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Prim1P20664 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prim1P20664 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.61■□□□□ 0.25
Prim1P20664 Gm4986-201ENSMUST00000119731 549 ntBASIC16.61■□□□□ 0.25
Prim1P20664 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.61■□□□□ 0.25
Prim1P20664 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prim1P20664 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.61■□□□□ 0.25
Prim1P20664 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Gm37629-201ENSMUST00000193635 1050 ntBASIC16.61■□□□□ 0.25
Prim1P20664 Gm19931-201ENSMUST00000198920 368 ntBASIC16.61■□□□□ 0.25
Prim1P20664 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prim1P20664 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.61■□□□□ 0.25
Prim1P20664 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prim1P20664 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.61■□□□□ 0.25
Prim1P20664 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.6■□□□□ 0.25
Prim1P20664 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prim1P20664 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prim1P20664 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prim1P20664 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prim1P20664 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prim1P20664 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prim1P20664 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC16.6■□□□□ 0.25
Prim1P20664 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Prim1P20664 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.6■□□□□ 0.25
Prim1P20664 Gm38092-201ENSMUST00000195600 653 ntBASIC16.6■□□□□ 0.25
Prim1P20664 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.6■□□□□ 0.25
Prim1P20664 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prim1P20664 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Prim1P20664 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Prim1P20664 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prim1P20664 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.6■□□□□ 0.25
Prim1P20664 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.6■□□□□ 0.25
Prim1P20664 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.59■□□□□ 0.25
Prim1P20664 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.59■□□□□ 0.25
Prim1P20664 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.59■□□□□ 0.25
Prim1P20664 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.59■□□□□ 0.25
Prim1P20664 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prim1P20664 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.59■□□□□ 0.25
Prim1P20664 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.59■□□□□ 0.25
Prim1P20664 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Prim1P20664 Gm37489-201ENSMUST00000191883 159 ntBASIC16.59■□□□□ 0.25
Prim1P20664 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC16.59■□□□□ 0.25
Prim1P20664 Gm42474-201ENSMUST00000201073 505 ntBASIC16.59■□□□□ 0.25
Prim1P20664 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.59■□□□□ 0.25
Prim1P20664 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms