Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.8□□□□□ -0.68
Tnfrsf9P20334 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm15376-201ENSMUST00000122258 783 ntBASIC10.8□□□□□ -0.68
Tnfrsf9P20334 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm42919-201ENSMUST00000197753 1284 ntBASIC10.8□□□□□ -0.68
Tnfrsf9P20334 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm18054-201ENSMUST00000207539 555 ntBASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm17917-201ENSMUST00000218561 953 ntBASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf9P20334 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf9P20334 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms