Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.2□□□□□ -0.3
VimP20152 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
VimP20152 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
VimP20152 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VimP20152 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VimP20152 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VimP20152 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VimP20152 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VimP20152 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VimP20152 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VimP20152 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VimP20152 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
VimP20152 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.2□□□□□ -0.3
VimP20152 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VimP20152 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VimP20152 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VimP20152 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VimP20152 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Gm2810-201ENSMUST00000118681 990 ntBASIC13.19□□□□□ -0.3
VimP20152 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.19□□□□□ -0.3
VimP20152 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.19□□□□□ -0.3
VimP20152 Mir5126-201ENSMUST00000175513 77 ntBASIC13.19□□□□□ -0.3
VimP20152 Ank2-226ENSMUST00000189368 339 ntBASIC13.19□□□□□ -0.3
VimP20152 Gm38225-201ENSMUST00000194001 393 ntBASIC13.19□□□□□ -0.3
VimP20152 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VimP20152 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.19□□□□□ -0.3
VimP20152 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VimP20152 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VimP20152 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.18□□□□□ -0.3
VimP20152 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VimP20152 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VimP20152 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VimP20152 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.18□□□□□ -0.3
VimP20152 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VimP20152 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.18□□□□□ -0.3
VimP20152 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.18□□□□□ -0.3
VimP20152 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Gm6916-202ENSMUST00000205523 195 ntBASIC13.18□□□□□ -0.3
VimP20152 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.18□□□□□ -0.3
VimP20152 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
VimP20152 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VimP20152 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VimP20152 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VimP20152 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VimP20152 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.18□□□□□ -0.3
VimP20152 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.17□□□□□ -0.3
VimP20152 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms