Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Gm27321-201ENSMUST00000185021 205 ntBASIC12.33□□□□□ -0.44
ApoeP08226 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ApoeP08226 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.33□□□□□ -0.44
ApoeP08226 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.33□□□□□ -0.44
ApoeP08226 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.33□□□□□ -0.44
ApoeP08226 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.33□□□□□ -0.44
ApoeP08226 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.33□□□□□ -0.44
ApoeP08226 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.33□□□□□ -0.44
ApoeP08226 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.32□□□□□ -0.44
ApoeP08226 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.32□□□□□ -0.44
ApoeP08226 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.32□□□□□ -0.44
ApoeP08226 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.32□□□□□ -0.44
ApoeP08226 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Gm27680-201ENSMUST00000184192 160 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Gm8000-201ENSMUST00000188378 592 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ApoeP08226 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.32□□□□□ -0.44
ApoeP08226 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.32□□□□□ -0.44
ApoeP08226 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.32□□□□□ -0.44
ApoeP08226 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ApoeP08226 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.32□□□□□ -0.44
ApoeP08226 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ApoeP08226 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.32□□□□□ -0.44
ApoeP08226 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ApoeP08226 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ApoeP08226 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ApoeP08226 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
ApoeP08226 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ApoeP08226 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.31□□□□□ -0.44
ApoeP08226 Gm44344-201ENSMUST00000200287 129 ntBASIC12.31□□□□□ -0.44
ApoeP08226 Gm44124-201ENSMUST00000204159 472 ntBASIC12.31□□□□□ -0.44
ApoeP08226 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.31□□□□□ -0.44
ApoeP08226 Gm17795-201ENSMUST00000214505 757 ntBASIC12.31□□□□□ -0.44
ApoeP08226 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms