Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm19309-201ENSMUST00000218295 205 ntBASIC12.82□□□□□ -0.36
Hoxa4P06798 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.82□□□□□ -0.36
Hoxa4P06798 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.82□□□□□ -0.36
Hoxa4P06798 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.82□□□□□ -0.36
Hoxa4P06798 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.81□□□□□ -0.36
Hoxa4P06798 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm12742-201ENSMUST00000117326 410 ntBASIC12.81□□□□□ -0.36
Hoxa4P06798 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm18584-201ENSMUST00000203098 964 ntBASIC12.81□□□□□ -0.36
Hoxa4P06798 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.81□□□□□ -0.36
Hoxa4P06798 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Mir339-201ENSMUST00000083659 96 ntBASIC12.81□□□□□ -0.36
Hoxa4P06798 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxa4P06798 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.81□□□□□ -0.36
Hoxa4P06798 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.81□□□□□ -0.36
Hoxa4P06798 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa4P06798 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.8□□□□□ -0.36
Hoxa4P06798 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
Hoxa4P06798 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.8□□□□□ -0.36
Hoxa4P06798 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.8□□□□□ -0.36
Hoxa4P06798 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxa4P06798 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Grk6-205ENSMUST00000224653 2976 ntBASIC12.8□□□□□ -0.36
Hoxa4P06798 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Hoxa4P06798 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa4P06798 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms