Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.94□□□□□ -0.66
Hoxa3P02831 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hoxa3P02831 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hoxa3P02831 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hoxa3P02831 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hoxa3P02831 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxa3P02831 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.93□□□□□ -0.66
Hoxa3P02831 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Gm7029-201ENSMUST00000173226 450 ntBASIC10.93□□□□□ -0.66
Hoxa3P02831 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.93□□□□□ -0.66
Hoxa3P02831 Gm37922-201ENSMUST00000195596 455 ntBASIC10.93□□□□□ -0.66
Hoxa3P02831 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.93□□□□□ -0.66
Hoxa3P02831 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.93□□□□□ -0.66
Hoxa3P02831 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hoxa3P02831 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxa3P02831 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hoxa3P02831 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hoxa3P02831 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.92□□□□□ -0.66
Hoxa3P02831 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hoxa3P02831 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.92□□□□□ -0.66
Hoxa3P02831 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Gm11618-201ENSMUST00000117946 267 ntBASIC10.92□□□□□ -0.66
Hoxa3P02831 Gm13123-201ENSMUST00000122173 492 ntBASIC10.92□□□□□ -0.66
Hoxa3P02831 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.92□□□□□ -0.66
Hoxa3P02831 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Gm5370-201ENSMUST00000187187 574 ntBASIC10.92□□□□□ -0.66
Hoxa3P02831 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.92□□□□□ -0.66
Hoxa3P02831 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms