Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col4a1P02463 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.68■□□□□ 0.1
Col4a1P02463 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.68■□□□□ 0.1
Col4a1P02463 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.68■□□□□ 0.1
Col4a1P02463 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.68■□□□□ 0.1
Col4a1P02463 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col4a1P02463 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.68■□□□□ 0.1
Col4a1P02463 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Col4a1P02463 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Col4a1P02463 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col4a1P02463 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.68■□□□□ 0.1
Col4a1P02463 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Gm23949-201ENSMUST00000104027 127 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 Mir874-201ENSMUST00000104769 76 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 Rmrp-201ENSMUST00000157463 271 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.67■□□□□ 0.1
Col4a1P02463 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.67■□□□□ 0.1
Col4a1P02463 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Col4a1P02463 Gm15711-201ENSMUST00000118889 535 ntBASIC15.67■□□□□ 0.1
Col4a1P02463 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.67■□□□□ 0.1
Col4a1P02463 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a1P02463 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col4a1P02463 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.66■□□□□ 0.1
Col4a1P02463 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Col4a1P02463 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Col4a1P02463 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
Col4a1P02463 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.66■□□□□ 0.1
Col4a1P02463 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.66■□□□□ 0.1
Col4a1P02463 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Gm9022-201ENSMUST00000182482 992 ntBASIC15.66■□□□□ 0.1
Col4a1P02463 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col4a1P02463 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a1P02463 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.66■□□□□ 0.1
Col4a1P02463 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Mir6546-201ENSMUST00000184460 62 ntBASIC15.65■□□□□ 0.1
Col4a1P02463 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.65■□□□□ 0.1
Col4a1P02463 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.65■□□□□ 0.1
Col4a1P02463 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.65■□□□□ 0.1
Col4a1P02463 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Gm9996-201ENSMUST00000070359 913 ntBASIC15.65■□□□□ 0.1
Col4a1P02463 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.65■□□□□ 0.1
Col4a1P02463 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a1P02463 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Col4a1P02463 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms