Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Gm8805-201ENSMUST00000117848 313 ntBASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Gm8810-201ENSMUST00000172895 754 ntBASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.25□□□□□ -0.61
Igh-VJ558P01758 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Mir1894-201ENSMUST00000122802 81 ntBASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gm24196-201ENSMUST00000179161 110 ntBASIC11.24□□□□□ -0.61
Igh-VJ558P01758 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gm37922-201ENSMUST00000195596 455 ntBASIC11.24□□□□□ -0.61
Igh-VJ558P01758 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.24□□□□□ -0.61
Igh-VJ558P01758 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igh-VJ558P01758 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms