Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.8□□□□□ -0.52
DhfrP00375 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
DhfrP00375 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
DhfrP00375 Gm4875-201ENSMUST00000118257 786 ntBASIC11.8□□□□□ -0.52
DhfrP00375 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.8□□□□□ -0.52
DhfrP00375 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.8□□□□□ -0.52
DhfrP00375 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.8□□□□□ -0.52
DhfrP00375 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.8□□□□□ -0.52
DhfrP00375 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.8□□□□□ -0.52
DhfrP00375 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.8□□□□□ -0.52
DhfrP00375 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.8□□□□□ -0.52
DhfrP00375 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
DhfrP00375 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DhfrP00375 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
DhfrP00375 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
DhfrP00375 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.79□□□□□ -0.52
DhfrP00375 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.79□□□□□ -0.52
DhfrP00375 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Gm12151-201ENSMUST00000121374 290 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
DhfrP00375 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.79□□□□□ -0.52
DhfrP00375 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Mir6977-201ENSMUST00000184960 64 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Gm29741-201ENSMUST00000192667 421 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Gm43703-201ENSMUST00000200523 763 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.79□□□□□ -0.52
DhfrP00375 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.79□□□□□ -0.52
DhfrP00375 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Gm20445-201ENSMUST00000061905 565 ntBASIC11.79□□□□□ -0.52
DhfrP00375 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
DhfrP00375 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
DhfrP00375 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
DhfrP00375 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
DhfrP00375 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
DhfrP00375 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
DhfrP00375 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.78□□□□□ -0.52
DhfrP00375 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
DhfrP00375 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms