Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.89□□□□□ -0.35
Pdlim1O70400 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.89□□□□□ -0.35
Pdlim1O70400 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Grk6-205ENSMUST00000224653 2976 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.88□□□□□ -0.35
Pdlim1O70400 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pdlim1O70400 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.88□□□□□ -0.35
Pdlim1O70400 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim1O70400 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim1O70400 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.87□□□□□ -0.35
Pdlim1O70400 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pdlim1O70400 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Gm12291-201ENSMUST00000121627 311 ntBASIC12.87□□□□□ -0.35
Pdlim1O70400 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.87□□□□□ -0.35
Pdlim1O70400 Gm45784-201ENSMUST00000188360 142 ntBASIC12.87□□□□□ -0.35
Pdlim1O70400 Gm37042-201ENSMUST00000193816 581 ntBASIC12.87□□□□□ -0.35
Pdlim1O70400 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.87□□□□□ -0.35
Pdlim1O70400 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pdlim1O70400 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms