Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
BckdkO55028 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BckdkO55028 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.1□□□□□ -0.47
BckdkO55028 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BckdkO55028 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Gm13226-201ENSMUST00000117838 404 ntBASIC12.1□□□□□ -0.47
BckdkO55028 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BckdkO55028 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.1□□□□□ -0.47
BckdkO55028 Gm38144-201ENSMUST00000192790 465 ntBASIC12.1□□□□□ -0.47
BckdkO55028 Gm7561-201ENSMUST00000211203 886 ntBASIC12.1□□□□□ -0.47
BckdkO55028 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
BckdkO55028 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.1□□□□□ -0.47
BckdkO55028 Gm17330-201ENSMUST00000221047 165 ntBASIC12.1□□□□□ -0.47
BckdkO55028 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
BckdkO55028 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BckdkO55028 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.1□□□□□ -0.47
BckdkO55028 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.1□□□□□ -0.47
BckdkO55028 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BckdkO55028 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BckdkO55028 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.09□□□□□ -0.47
BckdkO55028 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.09□□□□□ -0.47
BckdkO55028 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.09□□□□□ -0.47
BckdkO55028 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
BckdkO55028 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.09□□□□□ -0.47
BckdkO55028 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.09□□□□□ -0.47
BckdkO55028 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Snora78-201ENSMUST00000158630 128 ntBASIC12.09□□□□□ -0.47
BckdkO55028 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.09□□□□□ -0.47
BckdkO55028 Gm24196-201ENSMUST00000179161 110 ntBASIC12.09□□□□□ -0.47
BckdkO55028 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.09□□□□□ -0.47
BckdkO55028 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
BckdkO55028 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Gm6091-201ENSMUST00000098307 165 ntBASIC12.09□□□□□ -0.47
BckdkO55028 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
BckdkO55028 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
BckdkO55028 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.09□□□□□ -0.47
BckdkO55028 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
BckdkO55028 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.09□□□□□ -0.47
BckdkO55028 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.09□□□□□ -0.47
BckdkO55028 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.09□□□□□ -0.47
BckdkO55028 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.09□□□□□ -0.47
BckdkO55028 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms