Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm38671-201ENSMUST00000200573 130 ntBASIC11.34□□□□□ -0.59
Atf6bO35451 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.34□□□□□ -0.59
Atf6bO35451 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.34□□□□□ -0.59
Atf6bO35451 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Atf6bO35451 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Atf6bO35451 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.34□□□□□ -0.59
Atf6bO35451 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.34□□□□□ -0.59
Atf6bO35451 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Atf6bO35451 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.34□□□□□ -0.59
Atf6bO35451 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Atf6bO35451 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Atf6bO35451 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Atf6bO35451 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Gm5687-201ENSMUST00000118252 640 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Gm13612-201ENSMUST00000119276 390 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.33□□□□□ -0.6
Atf6bO35451 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.33□□□□□ -0.6
Atf6bO35451 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.33□□□□□ -0.6
Atf6bO35451 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Itm2b-204ENSMUST00000228637 783 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Atf6bO35451 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.33□□□□□ -0.6
Atf6bO35451 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Atf6bO35451 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Atf6bO35451 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.33□□□□□ -0.6
Atf6bO35451 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atf6bO35451 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Atf6bO35451 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atf6bO35451 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms