Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Gm7775-201ENSMUST00000218871 853 ntBASIC13.4□□□□□ -0.26
Trove2O08848 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.4□□□□□ -0.26
Trove2O08848 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.4□□□□□ -0.26
Trove2O08848 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trove2O08848 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trove2O08848 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trove2O08848 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trove2O08848 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Trove2O08848 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.39□□□□□ -0.27
Trove2O08848 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trove2O08848 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Gm15678-201ENSMUST00000117573 960 ntBASIC13.39□□□□□ -0.27
Trove2O08848 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.39□□□□□ -0.27
Trove2O08848 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Gm8927-201ENSMUST00000181978 981 ntBASIC13.39□□□□□ -0.27
Trove2O08848 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trove2O08848 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Gm3222-201ENSMUST00000071282 990 ntBASIC13.39□□□□□ -0.27
Trove2O08848 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.39□□□□□ -0.27
Trove2O08848 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Trove2O08848 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trove2O08848 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.39□□□□□ -0.27
Trove2O08848 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trove2O08848 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.38□□□□□ -0.27
Trove2O08848 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trove2O08848 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trove2O08848 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trove2O08848 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trove2O08848 Gm15920-201ENSMUST00000118998 402 ntBASIC13.38□□□□□ -0.27
Trove2O08848 Gm13385-201ENSMUST00000121089 220 ntBASIC13.38□□□□□ -0.27
Trove2O08848 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.38□□□□□ -0.27
Trove2O08848 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Trove2O08848 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.38□□□□□ -0.27
Trove2O08848 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Trove2O08848 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.38□□□□□ -0.27
Trove2O08848 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms