Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.02■□□□□ 0.16
Dctn1O08788 AA914427-201ENSMUST00000193194 1166 ntBASIC16.02■□□□□ 0.16
Dctn1O08788 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.02■□□□□ 0.16
Dctn1O08788 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Dctn1O08788 Gm22058-201ENSMUST00000083393 310 ntBASIC16.02■□□□□ 0.16
Dctn1O08788 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.02■□□□□ 0.16
Dctn1O08788 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dctn1O08788 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dctn1O08788 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dctn1O08788 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dctn1O08788 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dctn1O08788 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.02■□□□□ 0.15
Dctn1O08788 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.02■□□□□ 0.15
Dctn1O08788 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Dctn1O08788 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Dctn1O08788 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Dctn1O08788 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.01■□□□□ 0.15
Dctn1O08788 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Dctn1O08788 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Dctn1O08788 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.01■□□□□ 0.15
Dctn1O08788 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.01■□□□□ 0.15
Dctn1O08788 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.01■□□□□ 0.15
Dctn1O08788 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.01■□□□□ 0.15
Dctn1O08788 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.01■□□□□ 0.15
Dctn1O08788 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm43138-201ENSMUST00000199123 708 ntBASIC16.01■□□□□ 0.15
Dctn1O08788 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.01■□□□□ 0.15
Dctn1O08788 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.01■□□□□ 0.15
Dctn1O08788 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Dctn1O08788 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Dctn1O08788 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.01■□□□□ 0.15
Dctn1O08788 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Dctn1O08788 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16■□□□□ 0.15
Dctn1O08788 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16■□□□□ 0.15
Dctn1O08788 Gm11930-201ENSMUST00000117788 190 ntBASIC16■□□□□ 0.15
Dctn1O08788 Gm11439-201ENSMUST00000118598 409 ntBASIC16■□□□□ 0.15
Dctn1O08788 Gm15276-201ENSMUST00000145953 498 ntBASIC16■□□□□ 0.15
Dctn1O08788 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Gm8099-201ENSMUST00000200510 742 ntBASIC16■□□□□ 0.15
Dctn1O08788 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Dctn1O08788 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Dctn1O08788 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16■□□□□ 0.15
Dctn1O08788 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16■□□□□ 0.15
Dctn1O08788 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Dctn1O08788 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Dctn1O08788 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.99■□□□□ 0.15
Dctn1O08788 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.99■□□□□ 0.15
Dctn1O08788 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.99■□□□□ 0.15
Dctn1O08788 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Dctn1O08788 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Dctn1O08788 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Dctn1O08788 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Dctn1O08788 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Dctn1O08788 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Dctn1O08788 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Dctn1O08788 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms