Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC14.02□□□□□ -0.16
Usp35M0QWN7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp35M0QWN7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.02□□□□□ -0.16
Usp35M0QWN7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm23931-201ENSMUST00000103842 109 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm12203-201ENSMUST00000118235 598 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm12209-201ENSMUST00000120089 596 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm12403-201ENSMUST00000121384 959 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm27572-201ENSMUST00000183702 255 ntBASIC14.02□□□□□ -0.17
Usp35M0QWN7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp35M0QWN7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.01□□□□□ -0.17
Usp35M0QWN7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.01□□□□□ -0.17
Usp35M0QWN7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.01□□□□□ -0.17
Usp35M0QWN7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp35M0QWN7 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.01□□□□□ -0.17
Usp35M0QWN7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms