Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.22□□□□□ -0.45
Colca2F8VPY8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.22□□□□□ -0.45
Colca2F8VPY8 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.22□□□□□ -0.45
Colca2F8VPY8 Gm43916-201ENSMUST00000205062 967 ntBASIC12.22□□□□□ -0.45
Colca2F8VPY8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.21□□□□□ -0.45
Colca2F8VPY8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gm23251-201ENSMUST00000103773 110 ntBASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.21□□□□□ -0.45
Colca2F8VPY8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gm10051-201ENSMUST00000145209 414 ntBASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gm18038-201ENSMUST00000197900 485 ntBASIC12.21□□□□□ -0.45
Colca2F8VPY8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Colca2F8VPY8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Colca2F8VPY8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Colca2F8VPY8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Colca2F8VPY8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Colca2F8VPY8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms