Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc188F6WEU2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm23596-201ENSMUST00000104304 132 ntBASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm45500-201ENSMUST00000211676 803 ntBASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm17827-201ENSMUST00000211825 742 ntBASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Gm270-201ENSMUST00000223010 976 ntBASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc188F6WEU2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc188F6WEU2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Gm12218-201ENSMUST00000117666 399 ntBASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Gm11979-201ENSMUST00000119629 743 ntBASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Gm6485-201ENSMUST00000160676 439 ntBASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms