Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ube4aE9Q735 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.58■□□□□ 0.08
Ube4aE9Q735 Gm8018-201ENSMUST00000173536 789 ntBASIC15.58■□□□□ 0.08
Ube4aE9Q735 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.58■□□□□ 0.08
Ube4aE9Q735 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.58■□□□□ 0.08
Ube4aE9Q735 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.58■□□□□ 0.08
Ube4aE9Q735 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.58■□□□□ 0.08
Ube4aE9Q735 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube4aE9Q735 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Gm13813-201ENSMUST00000120998 787 ntBASIC15.57■□□□□ 0.08
Ube4aE9Q735 Gm14017-201ENSMUST00000121934 386 ntBASIC15.57■□□□□ 0.08
Ube4aE9Q735 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ube4aE9Q735 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.57■□□□□ 0.08
Ube4aE9Q735 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.56■□□□□ 0.08
Ube4aE9Q735 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Mir7070-201ENSMUST00000183657 86 ntBASIC15.56■□□□□ 0.08
Ube4aE9Q735 Gm3096-201ENSMUST00000185770 364 ntBASIC15.56■□□□□ 0.08
Ube4aE9Q735 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Gm8712-201ENSMUST00000221090 701 ntBASIC15.56■□□□□ 0.08
Ube4aE9Q735 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms