Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gm28043E0CXC2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Gm28043E0CXC2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gm28043E0CXC2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gm28043E0CXC2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Gm28043E0CXC2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Syt7-205ENSMUST00000224135 1557 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Gm7488-201ENSMUST00000117148 684 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Gm5354-201ENSMUST00000182417 973 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Gm6218-201ENSMUST00000219812 628 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gm28043E0CXC2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm28043E0CXC2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms