Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-2D3Z4R4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Gm45098-201ENSMUST00000207179 657 ntBASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.52□□□□□ -0.73
Nkx6-2D3Z4R4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 BC043934-202ENSMUST00000185694 2356 ntBASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gm13418-201ENSMUST00000119097 944 ntBASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gm5682-201ENSMUST00000173402 505 ntBASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-2D3Z4R4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms