Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Gm8099-201ENSMUST00000200510 742 ntBASIC11.67□□□□□ -0.54
Shank1D3YZU1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.67□□□□□ -0.54
Shank1D3YZU1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.67□□□□□ -0.54
Shank1D3YZU1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shank1D3YZU1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Gm11531-201ENSMUST00000117614 555 ntBASIC11.66□□□□□ -0.54
Shank1D3YZU1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Gm43378-201ENSMUST00000199336 582 ntBASIC11.66□□□□□ -0.54
Shank1D3YZU1 Gm45224-201ENSMUST00000208203 414 ntBASIC11.66□□□□□ -0.54
Shank1D3YZU1 Gm44551-201ENSMUST00000208804 171 ntBASIC11.66□□□□□ -0.54
Shank1D3YZU1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.66□□□□□ -0.54
Shank1D3YZU1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shank1D3YZU1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm20426-201ENSMUST00000173657 440 ntBASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm8285-201ENSMUST00000208293 759 ntBASIC11.65□□□□□ -0.54
Shank1D3YZU1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms