Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Usp42B2RQC2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp42B2RQC2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp42B2RQC2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp42B2RQC2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp42B2RQC2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp42B2RQC2 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.2■□□□□ 0.02
Usp42B2RQC2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Gm12384-201ENSMUST00000119228 919 ntBASIC15.2■□□□□ 0.02
Usp42B2RQC2 Gm13813-201ENSMUST00000120998 787 ntBASIC15.2■□□□□ 0.02
Usp42B2RQC2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.2■□□□□ 0.02
Usp42B2RQC2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.2■□□□□ 0.02
Usp42B2RQC2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Usp42B2RQC2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.19■□□□□ 0.02
Usp42B2RQC2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Gm8099-201ENSMUST00000200510 742 ntBASIC15.19■□□□□ 0.02
Usp42B2RQC2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.19■□□□□ 0.02
Usp42B2RQC2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp42B2RQC2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Usp42B2RQC2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Usp42B2RQC2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.18■□□□□ 0.02
Usp42B2RQC2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.18■□□□□ 0.02
Usp42B2RQC2 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.18■□□□□ 0.02
Usp42B2RQC2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Mir339-201ENSMUST00000083659 96 ntBASIC15.18■□□□□ 0.02
Usp42B2RQC2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp42B2RQC2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms