Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12616-201ENSMUST00000118594 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12501-201ENSMUST00000119163 529 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12624-201ENSMUST00000177615 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12621-201ENSMUST00000177760 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12615-201ENSMUST00000177970 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12622-201ENSMUST00000177975 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12627-201ENSMUST00000178412 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12625-201ENSMUST00000179122 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12614-201ENSMUST00000179586 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm12613-201ENSMUST00000180323 382 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm18304-201ENSMUST00000189162 546 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 CT571245.2-201ENSMUST00000218421 305 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn7aB1AYL1 Gm9361-201ENSMUST00000198695 1507 ntBASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn7aB1AYL1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms