Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Gm37956-201ENSMUST00000195208 2010 ntBASIC2.8□□□□□ -1.96
Gm4559A4IF42 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Gm4559A4IF42 Gm13535-201ENSMUST00000118714 1884 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm37032-201ENSMUST00000194882 2975 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm11427-201ENSMUST00000117952 1696 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm5721-201ENSMUST00000119845 1696 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm5681-201ENSMUST00000189217 1533 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm42597-201ENSMUST00000196663 1544 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm13120-201ENSMUST00000117343 1446 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm13104-201ENSMUST00000119651 1446 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm44190-201ENSMUST00000205083 1401 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm45867-201ENSMUST00000208201 2317 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm10110-202ENSMUST00000228705 3220 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 AW822252-205ENSMUST00000192662 1352 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm28536-201ENSMUST00000190971 1317 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 AC159621.2-201ENSMUST00000223519 1326 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm37194-201ENSMUST00000193092 3031 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm24121-201ENSMUST00000102029 106 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm12741-201ENSMUST00000118836 556 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm14824-201ENSMUST00000119421 737 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm11653-201ENSMUST00000119992 1009 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm14428-201ENSMUST00000120408 822 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm14925-201ENSMUST00000120611 438 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm11585-201ENSMUST00000120901 569 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm16471-201ENSMUST00000121940 618 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm25184-201ENSMUST00000157753 163 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm25434-201ENSMUST00000158278 167 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm5929-201ENSMUST00000166883 487 ntBASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.79□□□□□ -1.96
Gm4559A4IF42 1700112D23Rik-201ENSMUST00000167704 546 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Gm4559A4IF42 Gm3617-201ENSMUST00000173076 555 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms