Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm7851-201ENSMUST00000117574 323 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm8531-201ENSMUST00000188319 893 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm18123-201ENSMUST00000210874 822 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm12712-201ENSMUST00000120676 801 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm4775-201ENSMUST00000169588 402 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd6A3KFM7 Acot6-202ENSMUST00000222921 3622 ntBASIC10.43□□□□□ -0.74
Chd6A3KFM7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Mir326-201ENSMUST00000083637 95 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm12684-201ENSMUST00000118675 999 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm13624-201ENSMUST00000120263 462 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms