Protein–RNA interactions for Protein: A2AT37

Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), mousemouse

Known RBP Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf2A2AT37 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf2A2AT37 CT025678.1-201ENSMUST00000214795 2972 ntBASIC17.08■□□□□ 0.33
Upf2A2AT37 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Upf2A2AT37 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf2A2AT37 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Upf2A2AT37 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Upf2A2AT37 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf2A2AT37 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.08■□□□□ 0.32
Upf2A2AT37 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.08■□□□□ 0.32
Upf2A2AT37 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC17.08■□□□□ 0.32
Upf2A2AT37 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Upf2A2AT37 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC17.08■□□□□ 0.32
Upf2A2AT37 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf2A2AT37 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC17.07■□□□□ 0.32
Upf2A2AT37 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.07■□□□□ 0.32
Upf2A2AT37 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.07■□□□□ 0.32
Upf2A2AT37 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Gm29608-201ENSMUST00000190444 463 ntBASIC17.07■□□□□ 0.32
Upf2A2AT37 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Upf2A2AT37 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf2A2AT37 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Upf2A2AT37 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Upf2A2AT37 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Upf2A2AT37 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf2A2AT37 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Upf2A2AT37 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Upf2A2AT37 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Upf2A2AT37 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Upf2A2AT37 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf2A2AT37 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms