Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Scn1aA2APX8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn1aA2APX8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn1aA2APX8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Gm22323-201ENSMUST00000103832 109 ntBASIC13.58□□□□□ -0.24
Scn1aA2APX8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.58□□□□□ -0.24
Scn1aA2APX8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scn1aA2APX8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.58□□□□□ -0.24
Scn1aA2APX8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn1aA2APX8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.58□□□□□ -0.24
Scn1aA2APX8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm13492-201ENSMUST00000119772 665 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm10608-202ENSMUST00000213924 676 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm13736-201ENSMUST00000119272 253 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm30285-201ENSMUST00000214614 422 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.57□□□□□ -0.24
Scn1aA2APX8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn1aA2APX8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.56□□□□□ -0.24
Scn1aA2APX8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.56□□□□□ -0.24
Scn1aA2APX8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms