Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Gm2213-201ENSMUST00000197485 688 ntBASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav12d-1A0N8R0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm6447-201ENSMUST00000118905 835 ntBASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm5279-201ENSMUST00000199575 745 ntBASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav12d-1A0N8R0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms